PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914530.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 354aa    MW: 39258.8 Da    PI: 7.0192
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.6e-05115134120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++C+ C k+F+r  nL+ H+
  XP_023914530.1 115 FSCHVCLKTFNRYNNLQMHL 134
                     89*****************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MKPLEISLSI NPLASSSSSD HTDTEPLNLF PSMDQNSLDP HSSLSNLPSW PTVSMEENPK  60
ACSDDNEDVT VALNIGLPNH SSGSIDANTM ETANIAANNY WIPTPEQIHI GFTHFSCHVC  120
LKTFNRYNNL QMHLWGHGSQ YRRGADSLRG SQPQPMLGIP CYCCAEGCKN NISHPRAKPL  180
KDFRTLQTHY KRKHGMKPFA CRKCGKLLAV KGDWRTHEKN CGKRWLCVCS SDFKHKRSLR  240
DHIKAFGSGH SPCPPIFEGF DEELSAGTSA GQQSNGGASQ QSKETAGNYT DASASTIALS  300
LADKDSHNNK QLWSKRAAEA SDTEHQWDVL ETIETIPFHE VFIHSFGDYD TRGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-107C2H2 family protein