PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914243.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 616aa    MW: 68732.8 Da    PI: 9.5156
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.82.7e-20221088100
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                     s  ++s+rl +p +f+++++g +++   +tle +sg++W vkl   ++ +  +l +GW eFv ++ +++gDf+vF++dg+  f  +v+vf+ks
  XP_023914243.1  22 SAIFSSQRLKIPVRFVRHMKGRTAG--LVTLEGPSGNTWHVKL--IQQNDDLFLHQGWPEFVMDHFIESGDFLVFRYDGELHF--TVQVFDKS 108
                     667899**********999888776..7***************..7777789*************************996666..9***9985 PP
2B345.81.1e-14277369297
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     + ++++ +v+ s  l +p kf  +h   ++++++++l++++g+ W+v+    ++   +++l +GW  Fv+ n++k+gD+++F+l+++ e   +v+
  XP_023914243.1 277 VRIMKSFNVSGSYTLNIPYKFSMAHL--PNSKIKIVLQNLKGECWTVNSVPtTRVNTSHTLCGGWIAFVRCNDIKVGDICIFELVRECEL--RVH 367
                     56667778888899*******99995..346789**************955555556699************************986555..666 PP

                     EE CS
              B3  96 vf 97 
                     ++
  XP_023914243.1 368 IL 369
                     64 PP
3B3521.3e-165045861196
                     HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     + s  l +p +f ++h   ++++++++l++++g+ W+v+   + k+++ +++ +GW  Fv+ n++k gD+++F+l+g+ e  ++v++
  XP_023914243.1 504 SGSYTLKIPYQFSTAHL--PNCKTEIVLRNLKGKCWTVNSVPDSKGRMgHTFCGGWMAFVRGNDVKIGDICIFELVGKCE--MLVHI 586
                     5566799******9996..45899****************775555545**************************99433..57776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    
MDKETRQEMP NAKRPHFFDV YSAIFSSQRL KIPVRFVRHM KGRTAGLVTL EGPSGNTWHV  60
KLIQQNDDLF LHQGWPEFVM DHFIESGDFL VFRYDGELHF TVQVFDKSSC EKEAAFHSEC  120
SQDPGDLGNS MGQKRERDEV ASPSDKIFEG VPKKLRGSSS QLHLGCTVKN QEGKVDMYDG  180
EVCKHEVVAM AKTLREAICP EETRHCGSTL RNSSIASHSK ASKEKQVLDI VQFNTKASIQ  240
SRNGKEDDLY MHGRICLSML SAQEVAQSFT SSFPYFVRIM KSFNVSGSYT LNIPYKFSMA  300
HLPNSKIKIV LQNLKGECWT VNSVPTTRVN TSHTLCGGWI AFVRCNDIKV GDICIFELVR  360
ECELRVHILG VGREGLDCQN GKVACSRSSG GRAPSSHKTL KVLPKKTKGK SPKASKRCQE  420
APFSIDVRKQ CSASKTYTRA PVGSQSKAAN KKLVQRRKVI EDEVGSKTKG SMRMMLALDE  480
ERAARSFSSS FPNFVRIMKQ FNISGSYTLK IPYQFSTAHL PNCKTEIVLR NLKGKCWTVN  540
SVPDSKGRMG HTFCGGWMAF VRGNDVKIGD ICIFELVGKC EMLVHISGNG KKGLDHQSGA  600
DDDLALATYT SNKPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.17e-18B3 family protein