PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914235.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 392aa MW: 44685.4 Da PI: 8.2767

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.8	2.3e-19	34	112	13	97
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +rlv+pk+f ++ + k+ ++ tl+ +sg +W+v+l + +++++++ GW++Fvk++ L+e D +vF+++g s+f v ++ XP_023914235.1 34 DRRLVIPKTFSDNLK--KKLPQSATLKGPSGLTWDVEL--TTNDDTMFFNHGWQKFVKDHSLEETDLLVFRYNGWSQF--DVLIL 112 568*****85555..458889***********..9*****************************976888..66655 PP
2	B3	53.3	5e-17	261	355	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93 f+ v+ p +v k++ l++p + + +h +k+++ ++ l+ + +W+ k+ y++++g +t+GWk+Fv +n+L+e D+++Fk +r +f l XP_023914235.1 261 FQVVMRPTHVYKRHFLWIPAEWVMNHPLKENQ--EIYLRF-NEGTWQAKYFYNRGRGNGGITSGWKHFVLDNNLEEFDVCLFKPADRmdGSFVLD 352 88999*******************999666..688766.5579***99999999*********************776623445455 PP EEE CS B3 94 vkv 96 v++ XP_023914235.1 353 VSI 355 555 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MGDACKDWSK WAEDIYWTHF QTFHFYQFLL SGFDRRLVIP KTFSDNLKKK LPQSATLKGP 60 SGLTWDVELT TNDDTMFFNH GWQKFVKDHS LEETDLLVFR YNGWSQFDVL ILDGKNLCEK 120 GASYFVRKCG QTEHDNRCST KKRLREGSMD DVHTPLDVDA GCTSPVNSMG DDSVTVPSEQ 180 YINSLVANKR TRQSARHVGS KKPATNGEGV KSNPSDDAAD SPTKKNGAQV QQFASNRRPV 240 TEDEIKSALV LAQAASSDDT FQVVMRPTHV YKRHFLWIPA EWVMNHPLKE NQEIYLRFNE 300 GTWQAKYFYN RGRGNGGITS GWKHFVLDNN LEEFDVCLFK PADRMDGSFV LDVSIFRVVQ 360 EIAPLTVLTP PKRGRPKSIK STKPQACDTY KM

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MGDACKDWSK WAEDIYWTHF QTFHFYQFLL SGFDRRLVIP KTFSDNLKKK LPQSATLKGP  60
SGLTWDVELT TNDDTMFFNH GWQKFVKDHS LEETDLLVFR YNGWSQFDVL ILDGKNLCEK  120
GASYFVRKCG QTEHDNRCST KKRLREGSMD DVHTPLDVDA GCTSPVNSMG DDSVTVPSEQ  180
YINSLVANKR TRQSARHVGS KKPATNGEGV KSNPSDDAAD SPTKKNGAQV QQFASNRRPV  240
TEDEIKSALV LAQAASSDDT FQVVMRPTHV YKRHFLWIPA EWVMNHPLKE NQEIYLRFNE  300
GTWQAKYFYN RGRGNGGITS GWKHFVLDNN LEEFDVCLFK PADRMDGSFV LDVSIFRVVQ  360
EIAPLTVLTP PKRGRPKSIK STKPQACDTY KM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	7e-85	B3 family protein