PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914223.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 339aa MW: 37503.9 Da PI: 7.685

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.5e-32	154	207	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023914223.1 154 PRMRWTTTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 207 9****************************************************7 PP
2	Myb_DNA-binding	47.3	4.8e-15	155	206	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_023914223.1 155 RMRWTTTLHAHFVHAVELLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 206 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MFLSSNPIMR TTSSTTPSPL PDLSLQISPP SVSADFEAKE VSYDGLITRK AVIHSDRSST 60 TDSGSSGSDL SHENGGFYPA GAYNLGLTEP TLSLGFEMSD LSPPSLQLPR NYHQHHHHQH 120 QHHHHHNHQP QIYGREFKRN ARLISGVKRS VRAPRMRWTT TLHAHFVHAV ELLGGHERAT 180 PKSVLELMNV KDLTLAHVKS HLQMYRTVKS TDKGSGLGQT DIGLKQRPGL VNVEGVLPCE 240 KASPITTLEK TQRMETSSGS RSSHENALIY SDFKAKDTKE DGHNIEAPHV NASDGAKERL 300 DSSSMSPSNT LLNLEFTLGR PNWQMDYVES STELALLKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	2e-63	G2-like family protein