PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914222.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 385aa MW: 43793.4 Da PI: 7.0343

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.1e-19	35	113	14	98
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++l +pkkf+++ + k+ ++ +tl+ +sg +W+v+l + +++ ++ GW+eFvk++ L+e D +vF+++g s+f v +f+ XP_023914222.1 35 RQLAIPKKFVDNLK--KKLPQSVTLKGPSGLTWDVEL--KTIGDTLFFNHGWQEFVKDHSLEETDLLVFRYNGWSQF--DVLIFD 113 679*****6655..448889***********..999999************************977888..888876 PP
2	B3	44.6	2.6e-14	263	349	3	92
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 v+ p +v k+ l++p + a++h + +++ ++ l+ ++ +W+ ++++++ +g +t+GWk+Fv +n+L+e D+++Fk g+++++ XP_023914222.1 263 AVMRPTHVYKKFFLYIPLEWAANHLSLENQ--EIYLRF-NNDTWRARYNHNQARGYGGITSGWKHFVIDNNLEELDVCLFKPAGQMDGST 349 578899*************999544445..566554.669**8888888789*********************887765543 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MGETCKDWSK WAEDIYWTHF QTIHFSQYLL GDYDRQLAIP KKFVDNLKKK LPQSVTLKGP 60 SGLTWDVELK TIGDTLFFNH GWQEFVKDHS LEETDLLVFR YNGWSQFDVL IFDGKNLCEK 120 GASYFVRKCG PTEHDNGCLT KKKIREGSID DVHTPLDDGV RCPSPLNYVS DDSATVPSEQ 180 YIISLVGSKR TRRSAKSVGR KEPATCGEGM KSTASDDAEC SPIIKNGAQG QQYVSNRRLV 240 TEDEIKDALL LAQAASSDDT YLAVMRPTHV YKKFFLYIPL EWAANHLSLE NQEIYLRFNN 300 DTWRARYNHN QARGYGGITS GWKHFVIDNN LEELDVCLFK PAGQMDGSTI LDVSIFRVVQ 360 EISPRTLLTP PQKRGRRNSI KSTEA

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MGETCKDWSK WAEDIYWTHF QTIHFSQYLL GDYDRQLAIP KKFVDNLKKK LPQSVTLKGP  60
SGLTWDVELK TIGDTLFFNH GWQEFVKDHS LEETDLLVFR YNGWSQFDVL IFDGKNLCEK  120
GASYFVRKCG PTEHDNGCLT KKKIREGSID DVHTPLDDGV RCPSPLNYVS DDSATVPSEQ  180
YIISLVGSKR TRRSAKSVGR KEPATCGEGM KSTASDDAEC SPIIKNGAQG QQYVSNRRLV  240
TEDEIKDALL LAQAASSDDT YLAVMRPTHV YKKFFLYIPL EWAANHLSLE NQEIYLRFNN  300
DTWRARYNHN QARGYGGITS GWKHFVIDNN LEELDVCLFK PAGQMDGSTI LDVSIFRVVQ  360
EISPRTLLTP PQKRGRRNSI KSTEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-78	B3 family protein