PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914212.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 306aa    MW: 35028.4 Da    PI: 8.9961
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.63.9e-1715106199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 
                     ffkvl     +++ +l++p  f+++++g      + +l++++g+++ v++  +k+++   ++ +GW +Fvk+n L+ gDf+vFk+dg+ +   ++
  XP_023914212.1  15 FFKVL--IGDFSE-QLRIPPAFVKNFNGR--LLSKCSLRSSTGKVYIVRV--EKRGNNgLFFWSGWHDFVKDNSLDIGDFLVFKYDGNsTM--FK 100
                     56666..555555.5********888766..45599**************..444444499999**********************97455..58 PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     vk++ +
  XP_023914212.1 101 VKIYGR 106
                     888765 PP
2B340.55e-132062851599
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                      +++pk  a e +++  ++k ++l d++g  W ++l     +g   +t+GW +F++ n++ +gD+++F+++  +++ + v++fr+
  XP_023914212.1 206 YMTIPKFVAIEKDLI--SKKRVMLLDPTGSPWPIRLD-LVADGFLNMTNGWPDFCRGNKIGAGDTFIFEFV--TQTVMQVHIFRA 285
                     5899*9999999888..5568***************3.44555688***********************76..466779999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MAIKPECYKS NKPSFFKVLI GDFSEQLRIP PAFVKNFNGR LLSKCSLRSS TGKVYIVRVE  60
KRGNNGLFFW SGWHDFVKDN SLDIGDFLVF KYDGNSTMFK VKIYGRNTCE KDVRLAKREE  120
EYPIPFMKKG KQIQENAIIE ELKPDCYKES FGQKAINSNR IISGCSKSGE ELINDDIEEL  180
GMKSISSFKS QNSYFIATWT WYSQYYMTIP KFVAIEKDLI SKKRVMLLDP TGSPWPIRLD  240
LVADGFLNMT NGWPDFCRGN KIGAGDTFIF EFVTQTVMQV HIFRAGAKKE AQCLGVDKKI  300
ECTEIG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125132PFMKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-21B3 family protein