PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914141.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 684aa MW: 76444.5 Da PI: 6.7456

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27	7.7e-09	431	468	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_023914141.1 431 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 468 554459******************************88 PP
2	BELL	117.3	7.5e-38	293	363	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +elqk+k+kLls+leeVd+rY+ y++q+++v+ssFeavag+g+a++Y +lA+ka+SrhFrcLkd i++qi XP_023914141.1 293 YMELQKRKTKLLSMLEEVDRRYRNYCNQMKAVVSSFEAVAGHGAATVYSALASKAMSRHFRCLKDGIVSQI 363 689*******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MAREHCEDKS GNMVSSAGFC YSDVSSSNPT IQTHLVNQIQ GYESNQEIFN LTTGMEMIGF 60 SKNLQQQSDS NSVMWKGFYG KSQSHAGPSS SKTINESTSD FYQHEFNKSD FTTGISETSS 120 ENLIVGAHDN TGAWQENRLL VDDSLRCVFP CEGNERPSQG LSLSLSSSNP STIGLQSFEL 180 RHTNHHNQGE QDDMRFIASS SRDGFYGKSS NIQQPQMMQD VFLGKATNHH EGQFHLRNSK 240 FLAPTQELLN EFCCSLGTKQ TDQQKQKSHK AKQWEEDNGS SSSRKQALYS LEYMELQKRK 300 TKLLSMLEEV DRRYRNYCNQ MKAVVSSFEA VAGHGAATVY SALASKAMSR HFRCLKDGIV 360 SQIQATKKAM GEKDPAAPGT TKGETPRLRI LDQTLRQQRA FQQMSMMESH PWRPQRGLPE 420 RSVSVLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMVEDMYLE 480 EIKERENNMT SSDGVTNLDE NGRQNQNPPP TRPEDQKPTQ DQLVRIDSEC LSSIITNPDK 540 NDSKTSKTLQ NHHIQQQQQQ QQQHSFGRVA AETYGAMELD FSSYNHQSAG GGGAVSYPSD 600 SNANQNNFNG GGGGGGVSLT LGLQQHGGSG VSLAFSPASQ NSLFYARDHI EDCQPVQYSL 660 LDGEGQNLPY RNLMGAQLLH DLAG

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MAREHCEDKS GNMVSSAGFC YSDVSSSNPT IQTHLVNQIQ GYESNQEIFN LTTGMEMIGF  60
SKNLQQQSDS NSVMWKGFYG KSQSHAGPSS SKTINESTSD FYQHEFNKSD FTTGISETSS  120
ENLIVGAHDN TGAWQENRLL VDDSLRCVFP CEGNERPSQG LSLSLSSSNP STIGLQSFEL  180
RHTNHHNQGE QDDMRFIASS SRDGFYGKSS NIQQPQMMQD VFLGKATNHH EGQFHLRNSK  240
FLAPTQELLN EFCCSLGTKQ TDQQKQKSHK AKQWEEDNGS SSSRKQALYS LEYMELQKRK  300
TKLLSMLEEV DRRYRNYCNQ MKAVVSSFEA VAGHGAATVY SALASKAMSR HFRCLKDGIV  360
SQIQATKKAM GEKDPAAPGT TKGETPRLRI LDQTLRQQRA FQQMSMMESH PWRPQRGLPE  420
RSVSVLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMVEDMYLE  480
EIKERENNMT SSDGVTNLDE NGRQNQNPPP TRPEDQKPTQ DQLVRIDSEC LSSIITNPDK  540
NDSKTSKTLQ NHHIQQQQQQ QQQHSFGRVA AETYGAMELD FSSYNHQSAG GGGAVSYPSD  600
SNANQNNFNG GGGGGGVSLT LGLQQHGGSG VSLAFSPASQ NSLFYARDHI EDCQPVQYSL  660
LDGEGQNLPY RNLMGAQLLH DLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-146	TALE family protein