PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023914096.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | GATA | ||||||||
Protein Properties | Length: 306aa MW: 34291.9 Da PI: 10.0056 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.3 | 2.4e-19 | 175 | 208 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk + XP_023914096.1 175 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 208 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MTTPYHNSPP SPFPLELNQD QHHQRLLISA TPQVSSSSSS FSNPIFFNPA QDQGRCYYMA 60 LNHFQNDQEV DKLVGHGGSS CDHISLKNES ESENKFSFWN KESKIEDQSE TFSVKWMPSK 120 MRMMRKMINS EQTGHADIPL NSMKKFEDQK QPMAPAKTDN SSNNSFNNNP IVRVCADCNT 180 TKTPLWRSGP RGPKSLCNAC GIRQRKARRA MAAAAAAANG TILATNPPSM KSTKVQHKDK 240 RASKSYVPKF KKKCKLNTPD HGRKKVCFED FTISLSKNSA FQQVFPQDEK EAAILLMALS 300 YGLVHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G26150.1 | 1e-36 | GATA family protein |