PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913899.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 298aa MW: 34639.4 Da PI: 9.4419

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.6	3.3e-21	73	132	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +L+el++ +r+p+a++++++A+ l +++ ++V++WFqN++a+e++ XP_023913899.1 73 SRWNPTPEQILVLQELYQHgTRTPTADQIQQIAAYLrrfgKIEGKNVFYWFQNHKARERQ 132 7***************99************************************97 PP
2	Wus_type_Homeobox	114.2	6.5e-37	72	134	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQi +L+ely++G+rtP++++iq+i+a L+++Gkie+kNVfyWFQN+kaRerqk+ XP_023913899.1 72 SSRWNPTPEQILVLQELYQHGTRTPTADQIQQIAAYLRRFGKIEGKNVFYWFQNHKARERQKR 134 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGCGDGKEFN VSNSFTDLKL RPLIPKPMSV SPILTPLYCD STHYTNLFSL NHHPAYVTQQ 60 IETNFNTKPL ASSRWNPTPE QILVLQELYQ HGTRTPTADQ IQQIAAYLRR FGKIEGKNVF 120 YWFQNHKARE RQKRRRELAS HLQVQQHDCK SLVKKEPVMR RKVYKVEQAK KWAPLLNCRR 180 LIEESALMNR AATAEKISLG WIQFEGRVSQ KSRTVERQAT SQDKEMAHDL SLREAFPDPE 240 DQRREFKTLK LFPLYGDDQC DSDSNIGVTE EDIKLVPNKT SDNELAPSQY FEFLPLKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-41	WOX family protein