PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913781.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ARR-B

Protein Properties

Length: 497aa MW: 56055.8 Da PI: 6.2522

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	80.7	1.7e-25	184	237	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k ++rWt+eL e+F+ea+++L G e+A+Pk++ e+m+v+gLt++hv+SHLQkYR XP_023913781.1 184 KHKVRWTNELQEKFLEAINHL-GLERAVPKRVSEFMNVPGLTRHHVASHLQKYRQ 237 679****************.******************************6 PP
2	Myb_DNA-binding	39.8	1e-12	186	236	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + rWT e++e++++a++ lG + +k++++ m+ g+t+ ++ s++qky+ XP_023913781.1 186 KVRWTNELQEKFLEAINHLGLEraVPKRVSEFMNvPGLTRHHVASHLQKYR 236 679***********************************************7 PP
3	Response_reg	44.1	1.1e-15	29	129	7	107
SHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEE CS Response_reg 7 eplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdfls 99 + + ++ +++l+ +y ev + d+++eale ++e++ + +l+D+ mp+++ +++l +++e + p+i+++a+ e+ +l+ l+ G++ +++ XP_023913781.1 29 SSTCHHIATTMLKAGNY-EVIHYDKPTEALEAIQERKarLHFVLTDVYMPEVNRFQFLNCLEKEF-NFPVILMSANFMEKFVLQDLECGISLYIM 121 55556678888998888.9999*********999989******************9999.9************************ PP SS--HHHH CS Response_reg 100 Kpfdpeel 107 Kp++ +e+ XP_023913781.1 122 KPSSSNEV 129 998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MDSTHSSTIE WNKTDNFPSE ICILVQEGSS TCHHIATTML KAGNYEVIHY DKPTEALEAI 60 QERKARLHFV LTDVYMPEVN RFQFLNCLEK EFNFPVILMS ANFMEKFVLQ DLECGISLYI 120 MKPSSSNEVQ NLWQHLLAQK ASKTMASTSV SEATWVHQDA NRPQPRRRSE QKEVDKDDST 180 PRKKHKVRWT NELQEKFLEA INHLGLERAV PKRVSEFMNV PGLTRHHVAS HLQKYRQNLK 240 QVQEGKQSTR SVHDIISIND ADELSFLFGG SPLNTQQLNQ FSIKWPNRTP TQPGCSGNIT 300 VPSYSYAHML EPAYEHNHGK ASKIDAAPLN NNSGSYFGIA EHGTHKGLTQ VGSTHFQGDQ 360 ANINSLISML STESQSNANE HPRLFTSNPC VGGIKMTSDG KYVGHDQGSL IHANEIRSMT 420 PSMSQNSGRE TMNQYPSMFM NSIPQQQHSL PPPPPLPSLL QDESCSFGAN EDIDFPEEII 480 QLFLSSDFDN LISEEDI

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MDSTHSSTIE WNKTDNFPSE ICILVQEGSS TCHHIATTML KAGNYEVIHY DKPTEALEAI  60
QERKARLHFV LTDVYMPEVN RFQFLNCLEK EFNFPVILMS ANFMEKFVLQ DLECGISLYI  120
MKPSSSNEVQ NLWQHLLAQK ASKTMASTSV SEATWVHQDA NRPQPRRRSE QKEVDKDDST  180
PRKKHKVRWT NELQEKFLEA INHLGLERAV PKRVSEFMNV PGLTRHHVAS HLQKYRQNLK  240
QVQEGKQSTR SVHDIISIND ADELSFLFGG SPLNTQQLNQ FSIKWPNRTP TQPGCSGNIT  300
VPSYSYAHML EPAYEHNHGK ASKIDAAPLN NNSGSYFGIA EHGTHKGLTQ VGSTHFQGDQ  360
ANINSLISML STESQSNANE HPRLFTSNPC VGGIKMTSDG KYVGHDQGSL IHANEIRSMT  420
PSMSQNSGRE TMNQYPSMFM NSIPQQQHSL PPPPPLPSLL QDESCSFGAN EDIDFPEEII  480
QLFLSSDFDN LISEEDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	1e-46	ARR-B family protein