PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913575.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ERF

Protein Properties

Length: 603aa MW: 68427.7 Da PI: 4.9181

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.6	4.1e-20	62	119	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng...krkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p + + k+ r +lg+f++a eAa a+++a+k+++g XP_023913575.1 62 CKYRGVRQRT-WGKWVAEIREPFNgDSarrKSSRLWLGTFDSAVEAALAYDEAAKAMYG 119 79***999.******55544477555**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
DRKSRKRRNG CDSIEETLAK WKKLNYQYDF GKDGVDVTRK LPAKGSTKGC MPGKGGPENS 60 SCKYRGVRQR TWGKWVAEIR EPFNGDSARR KSSRLWLGTF DSAVEAALAY DEAAKAMYGN 120 LARLNFPKYC EESTYCNVLS SDTFKSSPKE LSDSYGVGEV KESKMNNLSP AGKLYRSKVA 180 VKESEEKQNC SEACVSNEST EELKVTPERS DQLKKERSEG CIPGCSQNNE TEELKLEHTL 240 RQPRKVKCKL RSDANPSNDV EVEMSTMSKE MKGELIGGLK SSGFNDKHNN RLHYEPIDVA 300 SNTSIHCKFS DDAEIDMMEM REETDGEFAE VLNSDNGFDG LYDFLHGVTT DVDCNPRTDN 360 MVIIRDEKMG ELSEICKFDD YIDLHNTYDV LHDAPINVNC NQISYSNPCN VEGEMPMMKK 420 QMKRELSEIM ESQYCNIFKD YNDLCKPSYN GVKSDKAFTR EDIQESFTDS SYSNGFDNRS 480 HYLHNWSTNR AIEPLGEGSS VNSTLKQEGN YDFNQLESAS IGYPLGGSPS YHRLQNSVTY 540 LPGSSNQKQE LDSGVDYNFG LSEQHMQLES GGGYNWDVVK SDYDTRLSEE QQYFDLRFPK 600 WGY

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

DRKSRKRRNG CDSIEETLAK WKKLNYQYDF GKDGVDVTRK LPAKGSTKGC MPGKGGPENS  60
SCKYRGVRQR TWGKWVAEIR EPFNGDSARR KSSRLWLGTF DSAVEAALAY DEAAKAMYGN  120
LARLNFPKYC EESTYCNVLS SDTFKSSPKE LSDSYGVGEV KESKMNNLSP AGKLYRSKVA  180
VKESEEKQNC SEACVSNEST EELKVTPERS DQLKKERSEG CIPGCSQNNE TEELKLEHTL  240
RQPRKVKCKL RSDANPSNDV EVEMSTMSKE MKGELIGGLK SSGFNDKHNN RLHYEPIDVA  300
SNTSIHCKFS DDAEIDMMEM REETDGEFAE VLNSDNGFDG LYDFLHGVTT DVDCNPRTDN  360
MVIIRDEKMG ELSEICKFDD YIDLHNTYDV LHDAPINVNC NQISYSNPCN VEGEMPMMKK  420
QMKRELSEIM ESQYCNIFKD YNDLCKPSYN GVKSDKAFTR EDIQESFTDS SYSNGFDNRS  480
HYLHNWSTNR AIEPLGEGSS VNSTLKQEGN YDFNQLESAS IGYPLGGSPS YHRLQNSVTY  540
LPGSSNQKQE LDSGVDYNFG LSEQHMQLES GGGYNWDVVK SDYDTRLSEE QQYFDLRFPK  600
WGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	2e-30	ERF family protein