PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023913339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 21745.9 Da PI: 8.8248 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.1 | 2.5e-14 | 47 | 97 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 + ykGVr +++g+Wv+e+r p+e + r++lg++ +++Aaka++ a+++l+ge XP_023913339.1 47 PVYKGVR--ERNGKWVCELRQPKE---KSRIWLGTWPCPDMAAKAYDVAALALKGE 97 68****6..679*********966...5*************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MALIEGSSPT NSDIMYQQCT SHLQTQPQSG MQKRKAGRKK FQETRHPVYK GVRERNGKWV 60 CELRQPKEKS RIWLGTWPCP DMAAKAYDVA ALALKGESAS LNFPDAACVL PRVKSSSSIR 120 DIQCAATKAA QAFPCVKSSS SRKLFLDEEE LFNMPRLLDS MAEGLIITPL SMQKGFNWDD 180 LENNTMDLTL WRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 1e-37 | ERF family protein |