PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023913257.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 208aa MW: 22859 Da PI: 9.1274 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.3 | 3.1e-14 | 4 | 61 | 38 | 99 |
EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l+ ++g +W+vkl +k++g++ +++GW eF++++ L g f+vF+++g+sef +v +f++ XP_023913257.1 4 LTIPNGTKWKVKL--TKSDGEVCFGNGWCEFASSHALALGHFLVFRYEGNSEF--FVLIFDA 61 56689********..**********************************9999..9*99997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 208 aa Download sequence |
MAYLTIPNGT KWKVKLTKSD GEVCFGNGWC EFASSHALAL GHFLVFRYEG NSEFFVLIFD 60 ATATEIEYPA AEIQDRTGEK PPVPLPHKRA KTNPSSSKGL RLEKSKMPFG VSLTRGESSG 120 SAHGVAGVAE TLVRENALKS ENPIFTVTIH PSYINGKDRA SLPHGIINYL PREGFTKDHT 180 TKGSTFTVKL KNVQQFEITS ELALSCIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49475.1 | 2e-19 | B3 family protein |