PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913152.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 828aa MW: 90822.7 Da PI: 5.8205

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.7	1.5e-15	501	539	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCk+skClk+YCeCfaag +C e C+C+dC+Nk XP_023913152.1 501 ACKRCNCKRSKCLKLYCECFAAGLYCVEPCSCQDCFNKP 539 689**********************************96 PP
2	TCR	51	2.9e-16	586	624	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeCf+ g+ Cs +C+C++CkN XP_023913152.1 586 RHKRGCNCKKSSCLKKYCECFQGGVGCSINCRCKGCKNA 624 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 828 aa Download sequence
MDTPVKNQVA TTSKFEDSPV FNYISNLSPI EPVKSIPTDH AFTSLTFASP SSAFPSPQIG 60 IHKESRFSIR RHQFSDPSKN ESSQIGNKNN TSEGVSVAVQ PSDSCTEKFE CCTSASSARE 120 ITTEPTDEPS ELVIELPNTL KYDCGSPDSD MVPPDAIKTG AAPDIAGTLE SFNEFLRDDS 180 KGKLHSFESE KNLRNICSIE QNIEACDWVA FVSGAADLLN LDSSMVEEHF EGQNHKSVDP 240 GTISFLSTVL QLPQDNVNDV EKTEAVGIIS CKQRELGETV TQSREFGNLK KTDQTSATFS 300 STLLDKLVVT DLSDKVDDKG KKCMDSSSKP GSHRLCSIRR RCLVFETSGA HKNKPICDSN 360 SSSPAIPSDC EVFSNEKQAQ INTASGYSST MLPGIGLHLN ALATAPIDNK VVKLESPAFR 420 SKQIIMLNSM VSCNPLTPGQ NPLDKSLTLK TLEGELAPHY NEAQVTENAP QTSTSAVSEE 480 FDQSSPRRKR FKLEHVEESN ACKRCNCKRS KCLKLYCECF AAGLYCVEPC SCQDCFNKPI 540 HESTVLETRR NIESRNPLAF APKVIRSADV VPEFGDESNK TPASARHKRG CNCKKSSCLK 600 KYCECFQGGV GCSINCRCKG CKNAFGRKDG AEETDIEGEE LEACKKNALD ASLHTVKEDE 660 KEHLDFPITE LSENSRSLSQ ESEGRKNALE ISLQEVNESE KENPDLSITP FSEISRPSIR 720 LPFSFSGKLP LSSLLSVGSS AQFCTSQKPR TKYSLSSRLK FETHLQMIPE DETPEALNST 780 SDVKSTSPNS KRVSPPKQEF GSNARRMGRK LILRSIPPFP SLSSTGDQ

Sequence ? help Back to Top

Protein Sequence Length: 828 aa Download sequence

MDTPVKNQVA TTSKFEDSPV FNYISNLSPI EPVKSIPTDH AFTSLTFASP SSAFPSPQIG  60
IHKESRFSIR RHQFSDPSKN ESSQIGNKNN TSEGVSVAVQ PSDSCTEKFE CCTSASSARE  120
ITTEPTDEPS ELVIELPNTL KYDCGSPDSD MVPPDAIKTG AAPDIAGTLE SFNEFLRDDS  180
KGKLHSFESE KNLRNICSIE QNIEACDWVA FVSGAADLLN LDSSMVEEHF EGQNHKSVDP  240
GTISFLSTVL QLPQDNVNDV EKTEAVGIIS CKQRELGETV TQSREFGNLK KTDQTSATFS  300
STLLDKLVVT DLSDKVDDKG KKCMDSSSKP GSHRLCSIRR RCLVFETSGA HKNKPICDSN  360
SSSPAIPSDC EVFSNEKQAQ INTASGYSST MLPGIGLHLN ALATAPIDNK VVKLESPAFR  420
SKQIIMLNSM VSCNPLTPGQ NPLDKSLTLK TLEGELAPHY NEAQVTENAP QTSTSAVSEE  480
FDQSSPRRKR FKLEHVEESN ACKRCNCKRS KCLKLYCECF AAGLYCVEPC SCQDCFNKPI  540
HESTVLETRR NIESRNPLAF APKVIRSADV VPEFGDESNK TPASARHKRG CNCKKSSCLK  600
KYCECFQGGV GCSINCRCKG CKNAFGRKDG AEETDIEGEE LEACKKNALD ASLHTVKEDE  660
KEHLDFPITE LSENSRSLSQ ESEGRKNALE ISLQEVNESE KENPDLSITP FSEISRPSIR  720
LPFSFSGKLP LSSLLSVGSS AQFCTSQKPR TKYSLSSRLK FETHLQMIPE DETPEALNST  780
SDVKSTSPNS KRVSPPKQEF GSNARRMGRK LILRSIPPFP SLSSTGDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	3e-94	CPP family protein