PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913108.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 294aa    MW: 32115.1 Da    PI: 7.5878
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.87e-10754447
                     S-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47
                     W++eE++ + +a++++  +     +W++Ia++++  +t  ++k ++q +
   XP_023913108.1  7 WSKEEEKTFENAIAMHWVDedckeQWEKIASMVP-SKTMDELKQHYQLL 54
                     **********************************.***********965 PP
2Myb_DNA-binding391.9e-12131175347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_023913108.1 131 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 175
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MSSGIIWSKE EEKTFENAIA MHWVDEDCKE QWEKIASMVP SKTMDELKQH YQLLVEDVSA  60
IEAGHIPLPN YVGEEASSSN KDCHGSSGAM ASDKRSNCGF GSGFPGLGHD STGHGGKGGS  120
RSEQERRKGI PWTEEEHRLF LLGLDKFGKG DWRSISRNFV ISRTPTQVAS HAQKYFIRLN  180
SMNRDRRRSS IHDITSVNNG DVASHQAPIT GQQTNMNPSS VATIGPPVKH RAQPHMPGLG  240
MYGTSVGHPV AAPPVHMASA VGTPVMLPPG HHPHSHPPYV MPVAYPMAPP PMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-81MYB family protein