PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913007.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 303aa    MW: 34123.3 Da    PI: 4.8115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.6e-21113163155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp+    r kr++lg+f+taeeAa  +++a+ kl+g
  XP_023913007.1 113 KKFRGVRQRP-WGRWAAEIRDPT----RrKRVWLGTFDTAEEAASEYDKAAVKLKG 163
                     59********.**********84....34************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MISFDDPPYS STMSVQTPRV KYSEQKVTTS KLVPDPKAMP SKLVRIIHTD PYATDSSSDD  60
EPERRPVRRI KRLVREISFE LPSLPSSSQL PKQELRKKRP ARSPESAAVT RRKKFRGVRQ  120
RPWGRWAAEI RDPTRRKRVW LGTFDTAEEA ASEYDKAAVK LKGPNAVTNF PNSVMTETSV  180
DVDSVSCKEI DSPASSDVAS SSPISVLRYE ESSPSDDLSF GDVDVFRLDF DVPLNLTNFV  240
LSKKPLVEEV KELEFDDFGF GDVDAFGFGI DGPLNLTDSM LSRKQLVQEE EEFGEFDVDS  300
FLV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196114RKKRPARSPESAAVTRRKK
297115RKKRPARSPESAAVTRRKK
3135162RRKRVWLGTFDTAEEAASEYDKAAVKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.16e-30ERF family protein