PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912853.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 266aa MW: 30185 Da PI: 8.175

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.5	4.4e-17	129	219	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v+ +l lp f++eh + e+ ++tl de+ ++ k+ +k++ l++GW++F+ +++L +gD +vF+l++ ++f +v XP_023912853.1 129 FLKPMLQSHVSGGFWLGLPVYFCKEHLPN--EDEMITLVDEDEDEFPTKYLAEKNG----LSGGWRGFAIDHELVDGDALVFQLINPTTF--KVY 215 89**********************644..5569***********666666....**********************986777..999 PP EE-S CS B3 96 vfrk 99 ++r+ XP_023912853.1 216 IIRA 219 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MVESKRSYEE CRKQRLEENK KRMEELNIGK LALALKASST PKSSPAKQVK RPRVSLDVSS 60 VPVRRSSRTA NKPPPNYKEV PIEPLGSLRR SYRRGSLLSR FYASDGARQD AIERAEQLES 120 DLGSDFPTFL KPMLQSHVSG GFWLGLPVYF CKEHLPNEDE MITLVDEDED EFPTKYLAEK 180 NGLSGGWRGF AIDHELVDGD ALVFQLINPT TFKVYIIRAS ELPYDEDKGK DSDASKLDNE 240 DKDKDSDASQ LDRIAKRTRA SRKRSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	5e-72	B3 family protein