PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912821.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 400aa MW: 45541.2 Da PI: 6.3279

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.9	6.9e-17	33	120	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k+l++s+v+ +l+lp +f++ h ++ ++ ++ledes ++++ k+i ++ l++GW++F a++L++ D++vF+l+g+ f+++v XP_023912821.1 33 FIKTLVRSNVTGGYWLRLPAQFCKMHL--PRHDIIVILEDESREEYKTKYIAENAA----LSSGWRRFSIAHKLCQDDVLVFQLIGT--FKFKVY 119 89*******************9995..457789***********666655....**********************995..444555 PP E CS B3 96 v 96 XP_023912821.1 120 T 120 4 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MVEVLYDRME AKSSALKQAM EVQASLPVES PSFIKTLVRS NVTGGYWLRL PAQFCKMHLP 60 RHDIIVILED ESREEYKTKY IAENAALSSG WRRFSIAHKL CQDDVLVFQL IGTFKFKVYT 120 VRLNGLAGVD GLFGPSNLDA CARGNDYEIE DKKIKIHKDT TYFDRVMQDI FGETIQINNL 180 KDLDTTTSFM NAANQYENSR KNLASDVLCG LRLTGSIANF KEVNSISGFT ILVNGETIDS 240 QFSDYQRVKY YDLCCSQNSF LHDNLRKNIN SKLAAEIISE TINIVDAIRA CELLTPVADF 300 EDWDNTLKGF ELLGMNVQFL HARVARLMSI AMEAAAVKDP QRKSKVRLEQ AHAEEVMDFL 360 KLKLSKLKKT KERLDDEIEA LKVNVVRHEI VFQEVVNAPW

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MVEVLYDRME AKSSALKQAM EVQASLPVES PSFIKTLVRS NVTGGYWLRL PAQFCKMHLP  60
RHDIIVILED ESREEYKTKY IAENAALSSG WRRFSIAHKL CQDDVLVFQL IGTFKFKVYT  120
VRLNGLAGVD GLFGPSNLDA CARGNDYEIE DKKIKIHKDT TYFDRVMQDI FGETIQINNL  180
KDLDTTTSFM NAANQYENSR KNLASDVLCG LRLTGSIANF KEVNSISGFT ILVNGETIDS  240
QFSDYQRVKY YDLCCSQNSF LHDNLRKNIN SKLAAEIISE TINIVDAIRA CELLTPVADF  300
EDWDNTLKGF ELLGMNVQFL HARVARLMSI AMEAAAVKDP QRKSKVRLEQ AHAEEVMDFL  360
KLKLSKLKKT KERLDDEIEA LKVNVVRHEI VFQEVVNAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-33	B3 family protein