PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023912583.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 224aa    MW: 25731.5 Da    PI: 4.7001
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023912583.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-2085134255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr ++ +g+W++eIrdp     r  kr +lg+f taeeAa+a+++a+ k++g
  XP_023912583.1  85 RYRGVRLRP-WGKWASEIRDP-----ReaKRKWLGTFQTAEEAARAYDKAAIKFRG 134
                     8********.**********9.....446*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDGFYASSVY MWCPWRTIIT EEQEHDIMVS ALKHVITGDI HGLTPQHLQL LEQQPVPASA  60
ATFSLPSTSK RSSKKKKEKN DNEKRYRGVR LRPWGKWASE IRDPREAKRK WLGTFQTAEE  120
AARAYDKAAI KFRGPRAKLN FPFSDYGEKP SDVEDQVAEQ DHNLEVNPNV NAETMTESEA  180
QTVEVANNND EENEFLDWLT LEELEGLLKD WPDNLNDPTN DPTQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17078KRSSKKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-22ERF family protein