PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023911906.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 267aa MW: 30665.9 Da PI: 8.6706 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3.2e-15 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W ++Ed++l+++++ +G+g W+ +++ g++R++k+c++rw++yl XP_023911906.1 13 RGAWCAWEDDILKNYIEIHGKGKWTDLPQRAGLRRCGKSCRLRWLNYL 60 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.7e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++k+lG+ W+ Iar+++ gRt++++k++w++ XP_023911906.1 66 RGNFSEDEEDLIIKLHKLLGNS-WSFIARRLP-GRTDNEIKNYWNTI 110 89******************99.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MGRRPCGAKG VIRGAWCAWE DDILKNYIEI HGKGKWTDLP QRAGLRRCGK SCRLRWLNYL 60 RPDIKRGNFS EDEEDLIIKL HKLLGNSWSF IARRLPGRTD NEIKNYWNTI LSKRIKNLTS 120 NSNPGIKPIA HPVIRPKAMR CTKVILSWQP NNNQILFNEN IVPYGNRENL FPSVQPENNI 180 SDCLIDLDTN YLLRSNVQNS DGQQTNEINV HEIALDLPVS RCNAKLKDLM DEGKPESWRA 240 TNPFQPNEAM DLNTLASFLD SEDAWIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 6e-54 | MYB family protein |