PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023911890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 267aa MW: 30749 Da PI: 7.9849 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.9 | 6.5e-15 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W ++Ed++l+++++ +G g W+ +++ g++R++k+c++rw++yl XP_023911890.1 13 RGAWCAWEDDILKNYIEIHGEGKWTDLPQRAGLRRCGKSCRLRWLNYL 60 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++k+lG+ W++Iar+++ gRt++++k++w++ XP_023911890.1 66 RGNFSKDEEDLIIKLHKLLGNS-WSLIARRLP-GRTDNEIKNYWNTI 110 89******************99.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MGRRPCCAKG VIRGAWCAWE DDILKNYIEI HGEGKWTDLP QRAGLRRCGK SCRLRWLNYL 60 RPDIKRGNFS KDEEDLIIKL HKLLGNSWSL IARRLPGRTD NEIKNYWNTI LSKRIKNLTL 120 DSNPGIKPVA HPIFRPKAVR CTKVILPWQP DNNQILFNEN IVPYGNRENL LPFVQPENNI 180 SNFQIDLDTN YLLRSDVQNS NGHQTNEINV CDIVLNLPVS GCDAKLQDLM DEGKPENWRA 240 TNPFQPNEAM DLNTLASFLD SEDTWIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 3e-55 | MYB family protein |