PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023910903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 235aa MW: 25787.4 Da PI: 8.3397 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.3 | 3.5e-18 | 34 | 79 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G ++W+ I+r++ gR++k+c++rw + XP_023910903.1 34 KGPWSAEEDRILTRLVERYGARNWSVISRYIK-GRSGKSCRLRWCNQ 79 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.8 | 5.2e-18 | 88 | 130 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++q+G++ W+tIar ++ gRt++ +k++w++ XP_023910903.1 88 PFSPAEDETILAAHAQYGNR-WATIARLLP-GRTDNAVKNHWNST 130 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MEASSTTSSS DSSSSDSSLS SKTPRNHNRP EKIKGPWSAE EDRILTRLVE RYGARNWSVI 60 SRYIKGRSGK SCRLRWCNQL SPNVEHRPFS PAEDETILAA HAQYGNRWAT IARLLPGRTD 120 NAVKNHWNST LKRRVKDQQM IEGGGCSIST NSLINNEGFA SGSLHCNNGF DEDEQFTALT 180 LAPPGIGGGG GGNGGVAERR SESLPTGFWD VMRDVIAREV RDYVSSTLSE NSGFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 4e-58 | MYB family protein |