PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910745.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 304aa    MW: 34168.1 Da    PI: 8.5673
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910745.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000225678123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_023910745.1 56 YSCSFCRREFRSAQALGGHMNVH 78
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MEQAQYLMWG KRKHSFNPHI PATPMNPLYN DSWEEQAFAE DAAGPLGGCI WPPRSYSCSF  60
CRREFRSAQA LGGHMNVHRR DRARLKQSPS SCNETQHPNH QNLHNPIQNS FTSLGFQHPS  120
QVCTLVYNPN PNSSDPGVMV SSASPSRVSA SSTQENCSAK SFINPHSSPI VQEHQKRSPI  180
SSSPSWSNLV ADKYYCVSDL KTEEEKNSRF VDSGYRAKGD YVTTDLSVSM NLVVRRTHPT  240
VSSGKDETTD NCKRRRTEPS SLPFLLKPRS VDRQHVQSKV LEVSPNSIED LDLELRLGDR  300
PLVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.11e-32C2H2 family protein