PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023910538.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 471aa MW: 52828.9 Da PI: 7.8821

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023910538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	3.9e-13	296	341	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YIk+L XP_023910538.1 296 NHVEAERQRREKLNNRFYALRSVVPNV-----SKMDKASLLADAVVYIKEL 341 699*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MEESSSSSPP SPLQQQLQYL VETRPEWWVY SIFWQASKDS NGRVALSWGD GYFRGTREFV 60 SKAISNKEDQ RNIYKAMTKG KQALFDEDMD VDRLVEGRVT ESDWFYIVSV TRTFGLRDCV 120 LGRAYGTGGY IWLTGDHELQ YYECDRVKEA RGHGVQTLLC IATSRGVVEL GSSDVIKEDW 180 SLVQFVKTLF GCESTSTSTA LVSKQGNNPE GQVPIAISRD VSFLNIGMNS VTPKEWNFQG 240 KQSDSDAMKE GVSFGRSSSD SGEPSDSDGL LAFERTENRI KKRGRKPVIG REIPINHVEA 300 ERQRREKLNN RFYALRSVVP NVSKMDKASL LADAVVYIKE LKAKIDELEA KLKAQSQRIK 360 MSLVNGFYDK PNITTIVDHN RATTSLSFSV PSMEVEVQIV GSEAIIRVQC PDVNFPSAKL 420 MNALRDLELR VHYASVSSVK EMMLQVVVVK VHNGFASGEA MRSAILQKIQ I

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MEESSSSSPP SPLQQQLQYL VETRPEWWVY SIFWQASKDS NGRVALSWGD GYFRGTREFV  60
SKAISNKEDQ RNIYKAMTKG KQALFDEDMD VDRLVEGRVT ESDWFYIVSV TRTFGLRDCV  120
LGRAYGTGGY IWLTGDHELQ YYECDRVKEA RGHGVQTLLC IATSRGVVEL GSSDVIKEDW  180
SLVQFVKTLF GCESTSTSTA LVSKQGNNPE GQVPIAISRD VSFLNIGMNS VTPKEWNFQG  240
KQSDSDAMKE GVSFGRSSSD SGEPSDSDGL LAFERTENRI KKRGRKPVIG REIPINHVEA  300
ERQRREKLNN RFYALRSVVP NVSKMDKASL LADAVVYIKE LKAKIDELEA KLKAQSQRIK  360
MSLVNGFYDK PNITTIVDHN RATTSLSFSV PSMEVEVQIV GSEAIIRVQC PDVNFPSAKL  420
MNALRDLELR VHYASVSSVK EMMLQVVVVK VHNGFASGEA MRSAILQKIQ I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-57	bHLH family protein