PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023909822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HB-other | ||||||||
Protein Properties | Length: 130aa MW: 14934.9 Da PI: 10.7477 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.7 | 1.2e-19 | 64 | 113 | 2 | 51 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNr 51 +kR++ t++ql +Le +F+kn++p+a re++A+ +++ter V++WFqNr XP_023909822.1 64 QKRQRATQDQLMTLEVEFNKNPTPTALVRERIAQDINMTERSVQIWFQNR 113 69***********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MADVMQAPID LSPYHQQSAV GDQDGSKTLM QSQSRAGTPS NPNMHASSRR PPRKSTLTQQ 60 QKNQKRQRAT QDQLMTLEVE FNKNPTPTAL VRERIAQDIN MTERSVQIWF QNRYAPLDRL 120 NLYRLLLTVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03250.1 | 6e-07 | HB-other family protein |