PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023908576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 571aa MW: 63128.6 Da PI: 7.279 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.3 | 1.5e-06 | 56 | 80 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F r+ L+ H rtH XP_023908576.1 56 YVCElaGCGKAFDRPVKLEIHRRTH 80 99**********************9 PP | |||||||
2 | zf-C2H2 | 22.2 | 3.8e-07 | 86 | 111 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y C+ dC+k+F rk++L+rHi+ H XP_023908576.1 86 YACGedDCDKTFQRKEHLTRHIKDkH 111 88999*****************9766 PP | |||||||
3 | zf-C2H2 | 20 | 1.9e-06 | 157 | 181 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC+ Cgk F+r+++L+rHi H XP_023908576.1 157 KCSepGCGKIFRRQETLQRHILQnH 181 688889***************8766 PP | |||||||
4 | zf-C2H2 | 10.6 | 0.0018 | 277 | 299 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cgk + ++ Lk H H XP_023908576.1 277 SCPECGKLCESNRALKAHRDIeH 299 6*****************98766 PP | |||||||
5 | zf-C2H2 | 16.1 | 3.1e-05 | 308 | 333 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC+ C++ F+ nLk+Hi++ H XP_023908576.1 308 HKCSwpGCDRGFTKAGNLKVHIQNvH 333 789999****************9988 PP | |||||||
6 | zf-C2H2 | 10.9 | 0.0014 | 359 | 378 | 5 | 23 |
TTTEEESSHHHHHHHHHH.T CS zf-C2H2 5 dCgksFsrksnLkrHirt.H 23 Cg Fs+k +L+ H rt H XP_023908576.1 359 GCGAGFSSKASLEEHVRTqH 378 7*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence |
MVVAKAMKRS APNGAEGTPT SKRVRYPEES QYQGSLDGSI PESTFTSTSA KRTKDYVCEL 60 AGCGKAFDRP VKLEIHRRTH TNERPYACGE DDCDKTFQRK EHLTRHIKDK HSDERPHICS 120 YSVTNAFGES VQCAKSFHTA AKLRRHVAAH EEKEQTKCSE PGCGKIFRRQ ETLQRHILQN 180 HLGEKAFRCT HFCEELQEQC GQAFETVGHL KGHVKRAHAI PVIRHYCDIC NTPGSQVSTA 240 GSSPDHAEIS VPTQTSRIGF TSYADLQVHI KMTHPPSCPE CGKLCESNRA LKAHRDIEHS 300 SLPERQQHKC SWPGCDRGFT KAGNLKVHIQ NVHAKQRTFI CGTFDLSQSK KVVGWTGNGC 360 GAGFSSKASL EEHVRTQHLG IPSKLAPSRL KKLRDEAASP SQSLSSMDTD ELTTPNDDDH 420 SMAMLTGYGY EKARPIACLE SHCIQRFRND YELSQHVELT HDWQVDDIED ALAEREALDG 480 GQFWIGGRED IGPSAIETQS DVQLRIKLQN ALLGDDVAGA GNMFDSNWRS PPVWESPPGG 540 TTSAISGSSR IVKDTAGVVE PMAIDPALSG P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 2e-14 | C2H2 family protein |