PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908546.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 360aa    MW: 40302.8 Da    PI: 4.7959
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-19127176255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r  r +lg++ taeeAa  +++a+ kl+g
  XP_023908546.1 127 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYETAEEAAMVYDNAAIKLRG 176
                     89*******.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDQSILCPIK YTEHRKVTKK HTKPHKAVSD GRKHMEPRVV RISVTDPDAT DSSSDEEQEN  60
NFFLRRQRVK RYVNEINIET SCKAAVVSNP RKRPSVESSA ASPSRKVRAV NKASSAATTT  120
TPPNGRKFRG VRQRPWGKWA AEIRDPARRV RLWLGTYETA EEAAMVYDNA AIKLRGPDAL  180
TNFVTPPPRP KQKPEINVAS VSGYDSGDEF HNLSSPTSVL RYRTQSSEEE ESEPPKQGPE  240
PVHEAVPNSE PQQQHEQPLV VEDMFQECQG ETSVSDDLGD FLPIDLPCFD DVFNFSAPDS  300
TVLFEPPLFF DDPIPDDIFK DDFGALFGDS FGSTSTSTTM NQGDDFFEDI LLGLDPLVML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-68ERF family protein