PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908482.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 270aa    MW: 30445.3 Da    PI: 8.7218
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.0005691113123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C k Fs++  +  H++ H
  XP_023908482.1  91 YVCEFCLKEFSSSKAFGGHQNAH 113
                     9***************9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MENNMLQTNF AASSLLSRRR SKNDDFFSDI HMEAKRLKLF GFDVDPYAKG EKYMKKFERQ  60
GSVRFSDKEL LGMEKSFEEK SSICEPAHKR YVCEFCLKEF SSSKAFGGHQ NAHKNERLNK  120
KLMQLQGEGD SFNVYLQPLQ SHSGFIHSHS SPCFIDFSSC APDITHHKES QIGLNSLDQD  180
QNLYSGASRV FKPIAQASHG SFEQKNSGRP VVIKPLPSYV SKKSCQSLCI RLGLPNAAPP  240
EARAIQFGKS KQCSSFSPLD FYDSQSEKDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.13e-10C2H2 family protein