PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023907713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 368aa MW: 40045.6 Da PI: 6.9243 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 25.4 | 3.6e-08 | 299 | 321 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k+F+r+s+L++Hi +H XP_023907713.1 299 HKCKICDKRFTRPSSLQTHIYSH 321 79******************998 PP | |||||||
2 | zf-C2H2 | 18.8 | 4.4e-06 | 327 | 351 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + C+ Cg++Fs snL+rH ++H XP_023907713.1 327 FACEvdGCGRHFSVVSNLRRHRKVH 351 789999*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MALAVDNRHQ QQQFSSANYD NMRYPQPQFT NPWVSAPPTG HNHMYATATS ASDPSRYAAH 60 APNVSAAYSS NTLAAPSMAS GILPLDPELF DQTNLQFAQD MSASRPYGSA YNPPSATSST 120 ASSYTPTSAP QFSASYGYQA DRRPSHPSVA FSYLDDQAEI PHIDMTDRFN TTSEAERQGY 180 NDALDASRGM VQMSQTDITP RNIYGSNTVR NPTDSYGFPT AHSSHSSISS ASTYPTYYNS 240 SVSEASVGDY SSANESVDMP NSRTLPRPSA LIAGSIPPAP QSMMGQFSSK VSSSSQKKHK 300 CKICDKRFTR PSSLQTHIYS HTGEKPFACE VDGCGRHFSV VSNLRRHRKV HKGDGKDHGS 360 PDDSNDEM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 2e-08 | C2H2 family protein |