PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023906347.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 149aa MW: 17103 Da PI: 6.2901 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 17 | 68 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ rg+++AeIrd ++ g r++lg+f t+eeAa+a++ a+ +++g+ XP_023906347.1 17 RYRGVRRRP-RGKYAAEIRDSTKHG--GRVWLGTFNTEEEAARAYDCAAFAMRGH 68 6********.8*********65543..9*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MEEDSKEKVK NGEKDVRYRG VRRRPRGKYA AEIRDSTKHG GRVWLGTFNT EEEAARAYDC 60 AAFAMRGHSA ILNFPDEHRL PQVESPPPTS MTSSLSLSPS SNSPSSSSTF ENMERTRSEQ 120 FEKQVLEFEY LDDKLLEELL DIENKTKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43410.1 | 4e-24 | ERF family protein |