PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905979.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 350aa    MW: 38603.7 Da    PI: 4.5248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.2e-1960110155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r kr +lg+f++a eAa a+++a+++++g
  XP_023905979.1  60 CNYRGVRQRI-WGKWVAEIREP---N-RgKRLWLGTFDSAAEAASAYDEAARAMYG 110
                     56*****998.**********8...3.35***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MDSSRKRKSR GDVESVAQRL AKWKEYNAQL NESKPACKVP AKGSKKGCMK GKGGPENGQC  60
NYRGVRQRIW GKWVAEIREP NRGKRLWLGT FDSAAEAASA YDEAARAMYG DSARLNFPDS  120
VNHRLLTESA RDCCSISTLS GPCSIGTPAG SDSITTTNQS EVCFPNVKSE NVEGELGMNK  180
LNSEFAEADD MPSSIVNTEV KDETLNAKEH NSSDMHGVRQ ELKNEATGVV NNCGDNEQDY  240
LQDYSVDEMF DVEEIMALLD NNPFGNTDSV MGFGFDADQV GFPGRNQFET PSNVLYELQN  300
PDAKLLGSLN HMEKPPSGAD YFVDLLKSDW LDKNNGVDGY LDLGLPDFRF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
149SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-44ERF family protein