PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905978.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 360aa    MW: 39703 Da    PI: 4.4909
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.4e-1970120155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r kr +lg+f++a eAa a+++a+++++g
  XP_023905978.1  70 CNYRGVRQRI-WGKWVAEIREP---N-RgKRLWLGTFDSAAEAASAYDEAARAMYG 120
                     56*****998.**********8...3.35***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MVVQILNSVD MDSSRKRKSR GDVESVAQRL AKWKEYNAQL NESKPACKVP AKGSKKGCMK  60
GKGGPENGQC NYRGVRQRIW GKWVAEIREP NRGKRLWLGT FDSAAEAASA YDEAARAMYG  120
DSARLNFPDS VNHRLLTESA RDCCSISTLS GPCSIGTPAG SDSITTTNQS EVCFPNVKSE  180
NVEGELGMNK LNSEFAEADD MPSSIVNTEV KDETLNAKEH NSSDMHGVRQ ELKNEATGVV  240
NNCGDNEQDY LQDYSVDEMF DVEEIMALLD NNPFGNTDSV MGFGFDADQV GFPGRNQFET  300
PSNVLYELQN PDAKLLGSLN HMEKPPSGAD YFVDLLKSDW LDKNNGVDGY LDLGLPDFRF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11419SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-44ERF family protein