PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023905630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 293aa MW: 32998.9 Da PI: 5.2654 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.7 | 2.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d vk +G g W+ a++ g++R++k+c++rw +yl XP_023905630.1 14 KGAWTALEDKILIDHVKTHGEGKWSNLAKETGLKRCGKSCRLRWMNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53 | 7.6e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+el+ +++k+lG++ W++Ia +++ gRt++++k++w++yl XP_023905630.1 67 RGNISQDEEELIMRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSYL 112 7899******************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MGRNPRCTKD GLNKGAWTAL EDKILIDHVK THGEGKWSNL AKETGLKRCG KSCRLRWMNY 60 LRPDIKRGNI SQDEEELIMR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS YLAKKTQDQI 120 PSPKSRTDQK KPTIRVHHES DALLEGKGVL VSAQHHVDDD QIHETKVPIF LTPTVETNMV 180 KIKSSISESS AGSPSTSKEE NMSDFILDLS SDDFCKMLDS DFAKLSDVDI NELHNIAIEG 240 DKDSLLVLSE ETENNGRESG QLNNSNMVSD FQSLFLDSDD GWLGDDLNIA FSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 4e-58 | MYB family protein |