PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023905083.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 297aa    MW: 33232.8 Da    PI: 9.1521
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023905083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.72.9e-2020111199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +p     +g l++pkkf++e+g+    s +  l+ ++g +W+vkl  +k++g++ +++GW eF++++ L  g f+vF++dg+sef   v 
  XP_023905083.1  20 FFKIIMPQTLQ-EGKLWIPKKFIREYGSH--LSDMAYLTIPNGTKWKVKL--TKSDGEVCFGNGWCEFASSHALALGHFLVFRYDGNSEF--SVL 107
                     77887665555.556***********966..8889***************..**********************************9999..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f++
  XP_023905083.1 108 IFDA 111
                     9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MTSQWRRDNV DDPAHLPTHF FKIIMPQTLQ EGKLWIPKKF IREYGSHLSD MAYLTIPNGT  60
KWKVKLTKSD GEVCFGNGWC EFASSHALAL GHFLVFRYDG NSEFSVLIFD ATATEIEYPA  120
AELQYAIGEK PPVPLPQKRA KTNPSSSKGS RLEKSKMPFR VYLTRGESSG SAHGVAGVAE  180
TLVRANALKS ENPLFTVTIH PSYINGKDRA SLSHGIINYL PREGFTKDYT TKGSTFTVKL  240
EVVDRLWPVK LYIYEGKYTS YVVSAGWAAF ARDNALQLGD NVQQSEITSE LAHSCIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.11e-28B3 family protein