PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904943.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 285aa    MW: 31844.5 Da    PI: 9.0085
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.53e-1920111199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +p     +g l++pkkf++e+g+    s    l+ ++g +W+vkl  +k++g++ +++GW eF++++ L  g f+vF++dg+ ef   v 
  XP_023904943.1  20 FFKIIMPQTLQ-EGKLWIPKKFIREYGSH--LSDVAYLTIPNGTKWKVKL--TKSDGEVCFGNGWCEFASSHALALGHFLVFRYDGNLEF--SVL 107
                     77887665555.556***********966..787999999**********..********************************997666..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f++
  XP_023904943.1 108 IFDA 111
                     9986 PP
2B3345.3e-11197285383
                     EE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                      +  ps+ + ++r++lp   + ++          + k +++t++le    r W vkl iy++k  ++v  +GW  F+++n L+ gD++vF+
  XP_023904943.1 197 VTIHPSYINGKDRVSLPHGIV-TYllregftkdYSTKGSTFTVKLEV-VDRLWPVKLyIYEGKYTSCVVFAGWATFARDNALQLGDVCVFE 285
                     566678888888888888887.5557777776533444666677665.669*****967788888988888*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MTSQWQRDNV DDPAHLPTHF FKIIMPQTLQ EGKLWIPKKF IREYGSHLSD VAYLTIPNGT  60
KWKVKLTKSD GEVCFGNGWC EFASSHALAL GHFLVFRYDG NLEFSVLIFD ATATEIEYPA  120
AELQYGTGEK PLVPLPQKRA KTNPSSSKGS RLEKSKMPFG AYLTRGESSG SAHGVTGVAE  180
TLVRANALKS KNPLFMVTIH PSYINGKDRV SLPHGIVTYL LREGFTKDYS TKGSTFTVKL  240
EVVDRLWPVK LYIYEGKYTS CVVFAGWATF ARDNALQLGD VCVFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.15e-29B3 family protein