PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023904679.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 242aa    MW: 26972.1 Da    PI: 6.7827
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023904679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1755104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr ++ +gr+v+eIr p   g+++r++lg+fg+ae+Aa+a++ a++ l+g
  XP_023904679.1  55 QFRGVRKRR-WGRYVSEIRLP---GQKTRIWLGSFGSAEMAARAYDSAALFLKG 104
                     69****887.**********8...557***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MSVMAMGEDQ HEAPQNQLKP TPLESKRCPN SKTNKKRTAQ KQQQQEAPLR QRDNQFRGVR  60
KRRWGRYVSE IRLPGQKTRI WLGSFGSAEM AARAYDSAAL FLKGNLASLN FPDMAHSLPR  120
PESSSRRDIQ SAAAKAALPL SDQNINRSAS ASASASSSSS EEDFWCGFDF DFDFDFDFNM  180
CTTSSSFQQV NNAAAEAPPL FMMSPLRFDS VSVDLSQPQD LTGLPMPSPT DDELFLASYL  240
HM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-32ERF family protein