PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023903819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 395aa MW: 44939.1 Da PI: 9.3684 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.7e-16 | 4 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++I+++m+ ++R +k+c +rw +yl XP_023903819.1 4 RQRWQPEEDALLRAYVKQYGPKEWNLISQRMPqpLHRDPKSCLERWKNYL 53 89**********************************************97 PP | |||||||
2 | Myb_DNA-binding | 35.2 | 2.8e-11 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l + + +++G++ Wk+Ia++++ gRt+k + +w + XP_023903819.1 59 KGSLTPEEQSLVISLQAKYGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788******************.*********.*****999999766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MKERQRWQPE EDALLRAYVK QYGPKEWNLI SQRMPQPLHR DPKSCLERWK NYLKPGLKKG 60 SLTPEEQSLV ISLQAKYGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQLKQ QQKQNHLHRN 120 NLNTNHHNCS EYSHSDCTDT IPAVVVGSTS SSEKVGHGPY DHILDTFAEK YVLPQPKNMA 180 PVLPGISLSD PDRVLSLGSN TPTTTTIATT SSSSVSVIPL WMNMNMNMNM NVSTTSSSAT 240 SSTTPSPSVS LSLSPSDPGL DPDINPTRVY MGQQMGTLVQ YVKEVEEGRQ SWVQHRKEAS 300 WRLSRLEQQL ESEKARKRRE KMEEIEAKIR CLREEELAFL GRIESEYKEE LNALHRDAET 360 KEAKLVESWC SKHVKLAKLV DLIGLGHTSH GFTVL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 316 | 321 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37630.1 | 2e-57 | MYB family protein |