PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023903012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 526aa MW: 57848.8 Da PI: 9.6449 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.7 | 4.9e-06 | 196 | 218 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C k F r+s+L rH r H XP_023903012.1 196 FACSTCAKGFARRSDLARHERIH 218 78*******************99 PP | |||||||
2 | zf-C2H2 | 16.5 | 2.4e-05 | 224 | 248 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C Cgk F ++s L++H r+H XP_023903012.1 224 HVCDhpGCGKQFIQRSALTVHSRVH 248 689999*****************99 PP | |||||||
3 | zf-C2H2 | 24 | 9.9e-08 | 254 | 276 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk+Fs++s+L rH r H XP_023903012.1 254 HMCERCGKPFSDSSSLARHRRIH 276 68*******************99 PP | |||||||
4 | zf-C2H2 | 22 | 4.3e-07 | 282 | 306 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ykCp dC k+F+r+ +L+rH++ H XP_023903012.1 282 YKCPyaDCQKTFTRRTTLTRHQSHH 306 9*********************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 526 aa Download sequence |
MAVLSVNSVR NWRNSREGGR AVPHGMDLTS LLNTNRSTAA AGFRNMQYEV PLPMTMNHDM 60 SGNAHYSQQN LYVPNNTGRI KSESTSERGV SPHASEHSSR YSSQTPQQNG MAFSQMASQL 120 ANGMAHARYP TPPQQQHMQQ NPMPIISHSY HPNQAQDQSY QQQAQMGAIQ QTAPQEHSPL 180 EGGRTSTGSS GLPKAFACST CAKGFARRSD LARHERIHSG VRPHVCDHPG CGKQFIQRSA 240 LTVHSRVHTG EKPHMCERCG KPFSDSSSLA RHRRIHSGKR PYKCPYADCQ KTFTRRTTLT 300 RHQSHHTGTI EESEAATAAA LASRMSMQGQ RSRGSDEEDY SQDGKSPMPQ HIDRPSSASP 360 ANGINGLPGQ LQRQSSEYYL NAMNSGIAAM PPHLRSEMQP SPRAQSPAQY AMPVTSAQTR 420 SALTSNPSSG YNPPQILEPP TTNAQQQTGV GNSSPHMTAS MGWQSPHATP HDNYSTYTAT 480 NGQYNNVNAT QMYYQQAAVQ QRPHSTGPVD FGQLRTGQEM WVQHQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.2 | 9e-19 | C2H2 family protein |