PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023902343.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 559aa MW: 60941.7 Da PI: 7.9884 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.1 | 3.5e-17 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv++v+++G g+W+++ r g+ R++k+c++rw ++l XP_023902343.1 34 KGPWTAAEDAILVEYVRKHGEGNWNAVQRNSGLARCGKSCRLRWANHL 81 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.8e-16 | 87 | 130 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l++++++++G++ W++ a+ ++ gRt++++k++w++ XP_023902343.1 87 KGAFTPEEERLILELHAKYGNK-WARMAAQLP-GRTDNEIKNYWNT 130 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 559 aa Download sequence |
MATKNSTGGL ATSEGGGSST GGAESGLGGA TLKKGPWTAA EDAILVEYVR KHGEGNWNAV 60 QRNSGLARCG KSCRLRWANH LRPNLKKGAF TPEEERLILE LHAKYGNKWA RMAAQLPGRT 120 DNEIKNYWNT RVKRRQRQGL PLYPHDIQPS SQTQSPNQTQ TQTQLQLQHQ YQSQSTPTTP 180 TTPTAPTTPT TPTTPTFHFQ SHAHHHPSFS LSPTPPPPPP THHQHHSFSL SPSKPQHFTT 240 NTSTSLPLFD PTNNSNTNTT PSSFTFHRPP PILGAPVRFK RYRETTGFSL PLSPAPHTTP 300 TTTTTTNNNN NMITSPTSIT PLGQLSSTQF PDISCFKFPL TYSHSAPQLI STQLELDQMM 360 SAYSMKQELP SSQLSPHHHH HHPPPPHPPP PATTMSEITI DTKVSAAAAN QGCGNGLLEG 420 LLDEAHALAI SNQGLRTQSF LGVKEEKRVF EGFKHWEGSS TIDCSPGVKP KEEPGVQINT 480 MQEDLSKLLN VIPSTMQIPS DWYSDSGEVS NGQSSGVTDE NIGIDMQHIA SLFPLGATTD 540 HSHSRTTGSC SWDNLPGIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.2 | 4e-70 | MYB family protein |