PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023902084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HSF | ||||||||
Protein Properties | Length: 237aa MW: 27493.3 Da PI: 8.4611 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 108.8 | 3.9e-34 | 28 | 119 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y ++ed+ ++++isw+ +g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++ weF ++ F+kg+kell++ XP_023902084.1 28 FLLKTYMLVEDPVTDDVISWNVEGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNR---------WEFCNDMFRKGEKELLCE 113 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_023902084.1 114 IRRRKA 119 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MLYNNSNMEG MCEKGLLEYV RKSSPPPFLL KTYMLVEDPV TDDVISWNVE GTAFVVWQPA 60 EFARDLLPTL FKHSNFSSFV RQLNTYGFRK VATNRWEFCN DMFRKGEKEL LCEIRRRKAW 120 SNKQQPVAPT QSTPQEFDED QRSSSTSSSS GFSTLIDENK RLKKENGVLN SELLSMKKKC 180 KELLDLVAKY AHSEKEEEDE RPKLFGVRLE VPGEREMKRK RAEIRESASI LLSQSCK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 1e-68 | HSF family protein |