PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023900834.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 159aa MW: 18598.4 Da PI: 10.3482 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.6 | 2.1e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_023900834.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAIIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 74.7 | 2.6e-25 | 76 | 158 | 3 | 85 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 ++++++ e+++++l++e+a + k+ie L+ ++R+llGe+L+++sl+eLqq+e+qLe+s+++iR++K ++++eqie+l+++++ XP_023900834.1 76 AQTNNKSIEQNMQHLKHEAATMMKKIEHLEVSKRRLLGEGLGTCSLEELQQIEEQLERSVSSIRARKAQVFKEQIEQLKERNE 158 4566668999*********************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVAIIIFSP RGKLYEFASF 60 SMQETIERYR RHTKDAQTNN KSIEQNMQHL KHEAATMMKK IEHLEVSKRR LLGEGLGTCS 120 LEELQQIEEQ LERSVSSIRA RKAQVFKEQI EQLKERNES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-80 | MIKC_MADS family protein |