PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023900507.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 825aa MW: 93638.2 Da PI: 6.4149

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023900507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.3	3.9e-16	63	137	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGFs+ + +++k +g i++ +f Cs+e +++++ ++ C+a++++++++++ w+vtk++++HnH+++ XP_023900507.1 63 FYDAYARRVGFSTHVGPFSRNKPDGPIVTWEFACSREIFKRKNIES--------------CNAMIRLERKDSNSWVVTKFVEDHNHSIV 137 9*************************************998877..............************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 825 aa Download sequence
MDVEGDNREN HVHGNSEHDN GEKQNLAGNS TEREVISQDD DDDETATPQV GMEFESEDAG 60 KTFYDAYARR VGFSTHVGPF SRNKPDGPIV TWEFACSREI FKRKNIESCN AMIRLERKDS 120 NSWVVTKFVE DHNHSIVSPS KVHYLRPRRH FAGATKSVVD TLDATGDVYV SMDGNSVAFQ 180 PNHVVRSASP VEPNHPIRSV GPLNYIRPSS RKRTLGRDAQ NLLNYFKKMQ SEHPGFFYAI 240 QLDDDNRMTN VFWVDARSRA AYNYFGDAVI FDTMYRPNQY QVPFAPFTGV NHHGQMVLFG 300 CALLLDESES SFTWLFKTWL SAMNDRPPVS ITTDQDRAIQ AAVLQVFPNT RHCICKWHIL 360 REGQERLAHI YLAHPSFYGE LYSCINFSET IDDFELSWGS LLDKYDLRKN EWLQAVYNAR 420 KQWAPVYFHG TFFAALSSNQ GVSSFFDGYV NQQTTIPLFF KQYERALEHS LEKEIEADYD 480 TICTTPVLKT PSPMEQQAAN LYTRKVFTKF QEELVETFVY TANNIEGDGV VSKYRVAKYE 540 HDHKAYMVNV DVSEMKANCS CQMFEYSGIL CRHILTVFTV TNVLTLPSHY ILKRWTRNAK 600 AGVGLDEQNS DPLGIESLTL RFNNLCWEAI KYAEEGSVAI ETYNAAMNAL REGGKRIASV 660 KKNVAKVTPL SSQGSGDSQD DNNKKTPMSF PEMAPSLWPW QEAMPHRFNL NDVGVPGADL 720 NQPSTAPVSI HRDGATSDNT VVLTCFKSMT WVIENKNSTP AGRVAVINLK LQDYGKNPVG 780 ETEVQFRLTR ITLEPMLRSM AYISQQLSTP TNRVAVINLK VQNLF

Sequence ? help Back to Top

Protein Sequence Length: 825 aa Download sequence

MDVEGDNREN HVHGNSEHDN GEKQNLAGNS TEREVISQDD DDDETATPQV GMEFESEDAG  60
KTFYDAYARR VGFSTHVGPF SRNKPDGPIV TWEFACSREI FKRKNIESCN AMIRLERKDS  120
NSWVVTKFVE DHNHSIVSPS KVHYLRPRRH FAGATKSVVD TLDATGDVYV SMDGNSVAFQ  180
PNHVVRSASP VEPNHPIRSV GPLNYIRPSS RKRTLGRDAQ NLLNYFKKMQ SEHPGFFYAI  240
QLDDDNRMTN VFWVDARSRA AYNYFGDAVI FDTMYRPNQY QVPFAPFTGV NHHGQMVLFG  300
CALLLDESES SFTWLFKTWL SAMNDRPPVS ITTDQDRAIQ AAVLQVFPNT RHCICKWHIL  360
REGQERLAHI YLAHPSFYGE LYSCINFSET IDDFELSWGS LLDKYDLRKN EWLQAVYNAR  420
KQWAPVYFHG TFFAALSSNQ GVSSFFDGYV NQQTTIPLFF KQYERALEHS LEKEIEADYD  480
TICTTPVLKT PSPMEQQAAN LYTRKVFTKF QEELVETFVY TANNIEGDGV VSKYRVAKYE  540
HDHKAYMVNV DVSEMKANCS CQMFEYSGIL CRHILTVFTV TNVLTLPSHY ILKRWTRNAK  600
AGVGLDEQNS DPLGIESLTL RFNNLCWEAI KYAEEGSVAI ETYNAAMNAL REGGKRIASV  660
KKNVAKVTPL SSQGSGDSQD DNNKKTPMSF PEMAPSLWPW QEAMPHRFNL NDVGVPGADL  720
NQPSTAPVSI HRDGATSDNT VVLTCFKSMT WVIENKNSTP AGRVAVINLK LQDYGKNPVG  780
ETEVQFRLTR ITLEPMLRSM AYISQQLSTP TNRVAVINLK VQNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein