PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023899958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 304aa MW: 34393.4 Da PI: 7.725 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.1 | 1.2e-14 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l +++ +G g W+ +++ g++R++k+c++rw++yl XP_023899958.1 15 RGAWTALEDKILSAYIRAHGEGKWRYLPKRAGLKRCGKSCRLRWLNYL 62 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.7 | 4.3e-16 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++++lG++ W++Ia +++ gRt++++k++w++ XP_023899958.1 68 RGNISHDEEELIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 112 78999*****************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MGRSPCCSKQ EGLNRGAWTA LEDKILSAYI RAHGEGKWRY LPKRAGLKRC GKSCRLRWLN 60 YLRPDIKRGN ISHDEEELII RLHNLLGNRW SLIAGRLPGR TDNEIKNYWN TTLGKKAKAQ 120 TSSPLAEQSP LRKSQDKKLA TKPNSTAAEP SNLVQASATP TQVIRTKARR CTKVLIPALP 180 SLNEHHSLYS TAIDPLEPQA LQSQPQNYHQ DSAKCEARGG TEELHETCAQ DSDFFNFSSN 240 EFQANHGDRN GDCNFNSSNI QGPDQSLPFD ETMFKDWTTN YCLEDNFNLD IESLTFLLDS 300 EEWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 7e-62 | MYB family protein |