PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023899956.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 252aa MW: 28225.7 Da PI: 6.9176

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023899956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ed+ll d++k +G g W I+++ g++R++k+c++rw++yl XP_023899956.1 14 KGTWTALEDQLLTDYIKTHGEGKWGNIPKETGLKRCGKSCRLRWLNYL 61 799*******************************************97 PP
2	Myb_DNA-binding	49	1.4e-15	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_023899956.1 67 RGNISVDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSN 111 788999**************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MGRSPCRTKE GLNKGTWTAL EDQLLTDYIK THGEGKWGNI PKETGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SVDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS NLGKKVKGEQ 120 SKHSIEVEQK TKTKLTNESP TLKSSSAIGT KASSCREVLV APPASKVENP ETDLAPTTSV 180 DEDSSNLVAI TSEENNAHNF DIDFNVEKAF LSDIWVSDFW NQCQFEFGNG IMEGGGSVGA 240 KNFSFYEEIL KD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	7e-61	MYB family protein