PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899915.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 341aa    MW: 37697.8 Da    PI: 5.1367
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.83.9e-13103154155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  XP_023899915.1 103 QKVSHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 154
                     6899*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGDSLSGFFD ENEFGESNLG SDDLFSNDLF NIFESLEGVV EFPPIDEVVV GSGEETPRLV  60
SQKSASSCSA LQESETEFEI SPKSRKRPKL MTCSEEANPE GQQKVSHITV ERNRRKQMNE  120
HLSVLRSLMP CFYVKRGDQA SIIGGVVDYI NELQQILQSL EAKKQRKVYT EVLSPRLIPS  180
SSPRPSPLSP RKPPLSPRLN LPISPRTPQP TSPYKPRVQQ GYLSPTMATS LEPSPSSSST  240
SSNINDNINE LVANSKSPIA DVEVKFSGPN LLLKTVSPPI PGQAMKIIST LEDLSLELLH  300
VKISTVDETM LNFFTIKIGI ECQLSAKELA HQIQQTFCEV H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.14e-97bHLH family protein