PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023899760.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YC
Protein Properties Length: 151aa    MW: 17087.4 Da    PI: 5.3209
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023899760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC51.12.9e-16111001098
           NF-YC  10 iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 
                      e++t+  + elP+ r+kki+k d+d++++ +ea  l++ + elf+  l+ +s   + e kr+ +k   i  av++ + + dfl+d  p 
  XP_023899760.1  11 EEENTEAIQPELPIGRVKKIMKLDNDINKVNSEALFLVTCSAELFLQFLAEKSAEITTERKRKIVKLEHIRIAVKKHQpTSDFLLDSLPV 100
                     4677888899****************************************************************9865389*****9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MAEEENASMA EEENTEAIQP ELPIGRVKKI MKLDNDINKV NSEALFLVTC SAELFLQFLA  60
EKSAEITTER KRKIVKLEHI RIAVKKHQPT SDFLLDSLPV PSSQPSDRPA TDQKHSRPVY  120
EKPVPAGTQR IDHFFHKSVN EAPILIDNDE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.11e-49NF-YC family protein