PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023899027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 306aa MW: 34829.1 Da PI: 6.6162 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.6 | 2.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed++l ++++ +G g W+ +++ g++R++k+c++rw++yl XP_023899027.1 14 RGAWTAQEDKILTEYIRIHGDGKWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.7e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_023899027.1 67 RGNISPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MGRSACCAKE GLNRGAWTAQ EDKILTEYIR IHGDGKWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKRVGDPQ 120 CPAQTPKHSY GNKLKQESKQ SNLSTHVIRT KAIRCSKVFL TPQPPSQYEH YFSSMELETV 180 GTGHQILDIG QLSTNNKLVE SDTYEDNNDN NHLNSLDFMM NFNTEEVCLT DLLSSDFPDM 240 CDITNYSDND TRRNDLSSTS EQPLILSQQL PQDWTTSDCV QLLPNVATNL QSLASLLDSG 300 EEWLAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 1e-66 | MYB family protein |