PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023898435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 211aa MW: 24506.5 Da PI: 4.5618 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 68.3 | 2.2e-21 | 21 | 146 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lp G+rF+P+ + v+ +L++ + +++l+l ++ik + +++++ + pk + + e+e ++F++ + ++ + r+tk+gyWk+ g+++ev XP_023898435.1 21 LPIGYRFSPSPAQFVKLFLCNWILSRQLPL-NHIKYIkYLFQLDADQVPKgqSKYICEDEAFYFTEINP---NEMLSIRTTKNGYWKTNGEEEEV 111 699***************************.7899996799*******953333346679999998765...567899999************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ vg k++ f+ grap+ge ++W ++eyrl XP_023898435.1 112 IH-GDNIVGFKTIWNFFWGRAPNGEISHWRIEEYRL 146 **.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MALLNNMKDS SSSSKPEPDF LPIGYRFSPS PAQFVKLFLC NWILSRQLPL NHIKYIKYLF 60 QLDADQVPKG QSKYICEDEA FYFTEINPNE MLSIRTTKNG YWKTNGEEEE VIHGDNIVGF 120 KTIWNFFWGR APNGEISHWR IEEYRLHPSV IPADELSNSM MEKIGRCVAC KIKNVEKEEE 180 AYRFSMMETQ TESDETLESS ESDYDENIGG N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 2e-17 | NAC family protein |