PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023898059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 255aa MW: 27699.6 Da PI: 5.4387 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.7e-17 | 60 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr +k+ +Wv+e r+p +k+ r++lg+f tae+Aa+a++ a+ +l+g XP_023898059.1 60 PVYRGVR-RKNPCKWVCEMREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 110 68****9.777*******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDVLRHYSDP QYLMGSDICS WEFASGSDRI VNLSDEEVML ASQNPKKRDG RKKFKETRHP 60 VYRGVRRKNP CKWVCEMREP NKKSRIWLGT FPTAEMAARA HDVAAIALRG RSGCLNFADS 120 AWRLPVPASA AAKDIQRAAA EAAEAFRPAE LDTVFGDESR WKLKSAEAAA VVVAAAAVAA 180 TAAAATAAVA VAATAAAVAV EMEKEGVFFI DEEAVFGMPG LLACLAEGML LPPPHRYDGD 240 DMETDTDMSL WSYSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 5e-60 | ERF family protein |