PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023898058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 135aa MW: 15187.6 Da PI: 11.0162 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 43 | 93 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr +k+ ++Wv+eIr+p +k+ r++lg+f tae+A +a++ a +l+g XP_023898058.1 43 PVYRGVR-RKSPQKWVCEIREP---NKKSRIWLGTFPTAEMATRAHDVALIALRG 93 68****9.677**********9...347************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MCSTESESGS ARMLNSLDKK VMLASQNPKR QDGRKKFKET RHPVYRGVRR KSPQKWVCEI 60 REPNKKSRIW LGTFPTAEMA TRAHDVALIA LRGQSGCLNF ADSMWKLPIP ASTTAKDIQR 120 TAAEAAKAFR PAKLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 4e-52 | ERF family protein |